Table
S1A. HNF4alpha Binding Motifs H4.1-71 and H4.142-217: sequence and original
literature reference. |
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version 1.1 |
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HNF4
Motif Finder, Sladek Lab Website |
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Literature |
Gene |
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H4 No.1 |
Motif Sequence |
Position2 |
Symbol3 |
Full Gene Name |
Species |
Reference |
PMID |
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H4.1 |
GGGCCAaAGGTCT |
-92/-104 |
Hmgcs2 |
HMG-CoA synthase |
rat |
Rodriguez et al. 1998 |
9464279 |
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|
H4.2 |
GGTTCAaAGGTCT |
-669/-681 |
Acaa1 |
3-ketoacyl-CoA
thiolase B |
rat |
Nicolas-Frances et al. 2000 |
10708554 |
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H4.3 |
GGGGCTaAGTCCA |
-109/-121 |
SERPINA1 |
alpha-1-anti-trypsin |
human |
Hardon et al. 1988 |
2844524 |
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|
H4.4 |
AGTCAAaAGTCCA |
-2758/-2770 |
AMBP |
alpha-1-microglobulin
& bikunin |
human |
Rouet et al. 1995 |
7533900 |
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H4.5 |
CTGCCAaGGGCCA |
-2786/-2774 |
AMBP |
alpha-1-microglobulin
& bikunin |
human |
Rouet et al. 1998 |
9729465 |
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H4.6 |
GTCTAAgAGTCCA |
-2924/-2936 |
AMBP |
alpha-1-microglobulin
& bikunin |
human |
Rouet et al. 1998 |
9729465 |
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H4.7 |
AGGACAaAGGTCA |
-558/-570 |
Acox |
acyl-CoA oxidase |
rat |
Tugwood et al. 1992 |
1537328 |
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H4.8 |
AGGTCAgGGTCCC |
-357/-345 |
ALDH2 |
aldehyde
dehydrogenase 2 |
human |
Pinaire et al. 1999 |
10352676 |
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H4.9 |
GGGTCAaAGGCAC |
-321/-309 |
ALDH2 |
aldehyde
dehydrogenase 2 |
human |
Stewart et al. 1998 |
9765594 |
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H4.10 |
AGGGCAgAGGGCA |
-395/-407 |
AGT |
angiotensinogen |
human |
Yanai et al. 1999 |
10574924 |
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H4.11 |
GGGGCCaAGGTTC |
-260/-272 |
AGT |
angiotensinogen |
human |
Yanai et al. 1999 |
10574924 |
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H4.12 |
AGGTCAaAGGCTG |
-73/-85 |
SERPINC1 |
antithrombin III |
human |
Tremp et al. 1995 |
7758957 |
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|
H4.13 |
AGTGTAgAGCCCA |
-111/-123 |
SERPINC1 |
antithrombin III |
human |
Fernandez-Rachubinski et al. 1996 |
8910619 |
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H4.14 |
AGTTCAaGGATCA |
-120/-132 |
APOA1 |
apolipoprotein A1 |
human |
Chan et al. 1993 |
8464705 |
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H4.15 |
GGGGTCaAGGGTT |
-198/-210 |
APOA1 |
apolipoprotein A1 |
human |
Hardon et al. 1988 |
2844524 |
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H4.16 |
AGGGTAaAGGTTG |
-721/-733 |
APOA2 |
apolipoprotein A2 |
human |
Ladias et al. 1992 |
1639815 |
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H4.17 |
GTCACAaAAGTCC |
-140/-128 |
APOA4 |
apolipoprotein A4 |
human |
Ktistaki et al. 1994 |
7984419 |
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H4.18 |
GGTCCAaAGGGCG |
-66/-78 |
APOB |
apolipoprotein B |
human |
Metzger et al. 1993 |
8344962 |
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H4.19 |
AGAACAaAGAGCA |
>55kb |
APOB |
apolipoprotein B |
human |
Antes et al. 2000 |
10859308 |
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H4.20 |
AGGCCAaAGTCCT |
-81/-93 |
APOC2 |
apolipoprotein C2 |
human |
Kardassis et al. 1998 |
9651383 |
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H4.21 |
TGGGCAaAGGTCA |
-70/-82 |
APOC3 |
apolipoprotein C3 |
human |
Sladek et al. 1990 |
2279702 |
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H4.22 |
AGTCCAgAGGTCA |
-2987/-2975 |
APOC3 |
apolipoprotein C3 |
human |
Vergnes et al. 1997 |
9366246 |
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H4.23 |
GGTCCAgAGGGCA |
-731/-719 |
APOC3 |
apolipoprotein C3 |
human |
Kardassis et al. 1997 |
9012660 |
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H4.24 |
TGATCAgACAAAG |
-144/-132 |
CEACAM1 |
biliary glycoprotein |
human |
Hauck et al. 1994 |
8055923 |
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H4.25 |
GAGTCAaAGGTCA |
-62/-74 |
RBP2 |
cellular retinol
binding protein 2 |
rat |
Nakshatri and Chambon 1994 |
8288643 |
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H4.26 |
AGACCAaAGTCCG |
-61/-49 |
Cyp2a4 |
cytochrome 2A4 |
mouse |
Yokomori et al. 1997 |
9408084 |
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H4.27 |
GGACCAaAGTCCA |
-117/-105 |
Cyp2c1 |
cytochrome 2C1 |
rabbit |
Chen et al. 1994a |
7772258 |
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H4.28 |
GGTCCAaAGTCCA |
-112/-100 |
Cyp2c2 |
cytochrome 2C2 |
rabbit |
Chen et al. 1994b |
8106524 |
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H4.29 |
AGACCAaAGTGCA |
-96/-84 |
Cyp2c3 |
cytochrome 2C3 |
rabbit |
Chen et al. 1994a |
7772258 |
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H4.30 |
GGGTCAaAGTCCT |
-150/-138 |
CYP2C9 |
cytochrome 2C9 |
human |
Ibeanu and Goldstein 1995 |
7794915 |
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H4.31 |
AGGGCAaAGGCCA |
-55/-43 |
CYP2D6 |
cytochrome 2D6 |
human |
Cairns et al. 1996 |
8810289 |
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H4.32 |
GTACCAaAGTCCA |
-103/-91 |
Cyp3A1 |
cytochrome 3A1 |
rat |
Ogino et al. 1999 |
9917326 |
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H4.33 |
TGGACTtAGTTCA |
-146/-134 |
CYP7A1 |
cytochrome 7A1 |
human |
Crestani et al. 1998 |
9799805 |
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H4.34 |
AGGTCCaAGGGCA |
-60/-48 |
Cyp8b1 |
sterol
12alpha-hydroxylase |
rat |
del Castillo-Olivares and Gil 2001 |
11574686 |
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H4.35 |
TGTCCAaAGTCCA |
-700/-688 |
AKR1C4 |
dihydrodiol
dehydrogenase 4 |
human |
zeki et al. 2001 |
11284743 |
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H4.36 |
AGGTCGaGAGGTC |
3496/3484 |
EPO |
erythropoietin |
human |
Blanchard et al. 1992 |
1448072 |
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H4.37 |
CTAGCAaAGGTTA |
18/30 |
F9 |
coagulation factor IX |
human |
Naka and Brownlee 1996 |
8562402 |
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H4.38 |
GTACCAaAGTACA |
-15/-27 |
F9 |
coagulation factor IX |
human |
Reijnen et al. 1992 |
1631121 |
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H4.39 |
AGTGGTaAGGTCG |
6/-6 |
F9 |
coagulation factor IX |
human |
Naka and Brownlee 1996 |
8562402 |
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H4.40 |
CGGGCAaAGTTCT |
-4/-16 |
F7 |
coagulation factor
VII |
human |
Arbini et al. 1997 |
8978290 |
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H4.41 |
AGGGCAaAGGTCA |
-35/-47 |
F7 |
coagulation factor
VII |
mouse |
Stauffer et al. 1998 |
9442072 |
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H4.42 |
GGGGCAtAAGTCT |
-123/-111 |
F8 |
coagulation factor
VIII |
human |
Figueiredo and Brownlee 1995 |
7744832 |
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H4.43 |
GGAGCAaAGTCCA |
-47/-59 |
F10 |
coagulation factor X |
human |
Miao et al. 1992 |
1313796 |
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H4.44 |
AAACCAaAGTTCA |
-32/-44 |
GUCY2C |
guanylyl cyclase C |
human |
Swenson et al. 1999 |
10070050 |
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|
H4.45 |
GGGGTAaAGGTTC |
1151/1139 |
N/A |
hepatitis B virus
enhancer I |
human HBV |
Garcia et al. 1993 |
8389913 |
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H4.46 |
AGTCCAaGAGTCC |
1674/1662 |
N/A |
hepatitis B virus
enhancer II |
human HBV |
Guo et al. 1993 |
8417343 |
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H4.47 |
AGGTTAaAGGTCT |
1757/1769 |
N/A |
hepatitis B virus
nucleocapsid |
human HBV |
Raney et al. 1997 |
8995626 |
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H4.48 |
AGGTCAgGGTCCA |
-124/-112 |
MST1 |
hepatocyte growth
factor-like protein |
human |
Waltz et al. 1996 |
8621550 |
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H4.49 |
GGTCCAaAGTTCA |
-267/-255 |
Hnf1a |
hepatocyte nuclear
factor 1alpha |
Xenopus |
Zapp et al. 1993 |
8413240 |
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H4.50 |
AGTCCAaAGTTCA |
-63/-51 |
TCF1 |
hepatocyte nuclear
factor 1alpha |
human |
Gragnoli et al. 1997 |
9313764 |
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H4.51 |
GGGCTGaAGTCCA |
-70/-58 |
TCF1 |
hepatocyte nuclear
factor 1alpha |
human |
Sladek, unpublished |
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H4.52 |
CGGGCAaAGGCCA |
-652/-640 |
Onecut1 |
hepatocyte nuclear
factor 6 |
rat |
Lahuna et al. 2000 |
10674400 |
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H4.53 |
GGGCCAaGGGTCA |
-355/-343 |
HIV LTR |
HIV long terminal repeat |
hHIV |
Ladias 1994 |
8119938 |
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H4.54 |
AGTTCAaAGTTCA |
-84/-72 |
Fabp2 |
intestinal fatty acid binding protein |
rat |
Rottman and Gordon 1993 |
8505324 |
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H4.55 |
GGGCCAgAGTCCA |
-130/-142 |
Pklr |
liver-type pyruvate
kinase |
rat |
Diaz Guerra et al. 1993 |
8246989 |
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H4.56 |
AGGTCTcAGGTCA |
-83/-71 |
MST1 |
macrophage
stimulating protein |
human |
Ueda et al. 1998 |
9668124 |
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H4.57 |
GGGTCAcAGTGCA |
21/33 |
MST1 |
macrophage
stimulating protein |
human |
Ueda et al. 1998 |
9668124 |
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H4.58 |
CGGGTAaAGGTGA |
-323/-311 |
ACADM |
medium-chain acylCoA
dehydrogenase |
human |
Carter et al. 1993 |
8314750 |
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H4.59 |
GGTTTAaAGTTCA |
95/83 |
Otc |
ornithine
transcarbamylase |
rat |
Nishiyori et al. 1994 |
8288597 |
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H4.60 |
GGATCAaAGGTCC |
-18/-30 |
Otc |
ornithine
transcarbamylase |
rat |
Kimura et al. 1993 |
8496174 |
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H4.61 |
AGTTCAgAGGTTA |
180/168 |
Otc |
ornithine
transcarbamylase |
rat |
Nishiyori et al. 1994 |
8288597 |
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H4.62 |
GGCTTAaAGTTCA |
-112/-100 |
Otc |
ornithine
transcarbamylase |
rat |
Kimura et al. 1993 |
8496174 |
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H4.63 |
CGGCCAaAGGTCA |
-439/-451 |
Pck1 |
phosphoenol pyruvate carboxykinase (PEPCK)
|
rat |
Hall et al. 1992 |
1333043 |
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H4.64 |
GGGGCAaAGTCAA |
22/10 |
Prlr |
prolactin receptor |
rat |
Moldrup et al. 1996 |
8776726 |
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H4.65 |
GGGTTAaAGGTTG |
-23/-35 |
SHBG |
sex hormone-binding
globulin |
human |
Janne and Hammond 1998 |
9852068 |
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H4.66 |
GGGTCAaGGGTCA |
-82/-70 |
SHBG |
sex hormone-binding
globulin |
human |
Janne and Hammond 1998 |
9852068 |
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H4.67 |
AGGTCAaAGATTG |
-68/-56 |
Trf |
transferrin |
mouse |
Schaeffer et al. 1993 |
8226864 |
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H4.68 |
GGCAAGgTTCATA |
-151/-139 |
Ttr |
transthyretin |
mouse |
Sladek et al. 1990 |
2279702 |
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H4.69 |
AGATCAaAGAGCA |
-3586/-3598 |
Tat |
tyrosine aminotransferase |
rat |
Nitsch et al. 1993 |
8100067 |
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H4.70 |
AGTCCAaAGGTCC |
1818/1806 |
WhvEnII |
woodchuck hepatitis
virus enhancer II |
woodchuck |
Ueda et al. 1996 |
8676498 |
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H4.71 |
GGAGTAaAGTTCA |
2150/2162 |
Aldob |
aldolase B |
rat |
Gregori et al. 1998 |
9737987 |
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H4.142 |
TGGGCAaAGGTCG |
-193/-181 |
Ghr |
growth hormone
receptor 1A |
bovine |
Jiang and Lucy 2001 |
11376119 |
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H4.143 |
TGGGCAaAGAGCA |
-164/-152 |
Ghr |
growth hormone
receptor 1A |
bovine |
Jiang and Lucy 2001 |
11376119 |
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H4.144 |
CTGAAGgGCTCAC |
-85/-97 |
MTTP |
microsomal
triglyceride transfer protein |
human |
Hagan et al. 1994 |
7961826 |
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H4.145 |
TGGGAGgGCTGAC |
-79/-91 |
Mtp |
microsomal
triglyceride transfer protein |
hamster |
Hagan et al. 1994 |
7961826 |
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H4.146 |
AGGTCAgAGACCT |
>15 kb |
APOE |
apolipoprotein E |
human |
Dang et al. 1995 |
7673250 |
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H4.147 |
ATACCAaAGTTCA |
-4040/-4028 |
AFP |
alpha fetal protein |
human |
Nakabayashi et al. 2004 |
15144905 |
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H4.148 |
AGGACAaAGGCCA |
-739/-727 |
Cyp4a6 |
cytochrome P450 4A6 |
rabbit |
Muerhoff et al. 1992 |
1605646 |
|
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H4.149 |
TGGGCAaGGGTCA |
-21/-9 |
Cyp4a6 |
cytochrome P450 4A6 |
rabbit |
Muerhoff et al. 1992 |
1605646 |
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H4.150 |
TAGGCAaGAGGCA |
-21/-9 |
CYP4A1 |
cytochrome P450 4A1 |
rat |
Muerhoff et al. 1992 |
1605646 |
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H4.151 |
GGGACAaAGTTCA |
-237/-225 |
Hnf1 |
hepatocyte nuclear
factor 1 |
salmon |
McNair et al. 2000 |
11085951 |
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H4.152 |
TGAGCAaAGTCTT |
-6478/-6466 |
Hnf4a |
hepatocyte nuclear
factor 4alpha |
mouse |
Bailly et al. 2001 |
11522818 |
|
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H4.153 |
AGACCTtTGAGTT |
-1954/-1942 |
PAX4 |
paired homeodomain
transcription factor |
human |
Smith et al. 2000 |
10967107 |
|
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|
H4.154 |
AGGGCAaGGTCCA |
208/220 |
CYP8B1 |
sterol 12alpha
hydroxylase |
human |
Zhang and Chiang 2001 |
11535594 |
|
|
|
H4.155 |
TGGGCAaAGTCCT |
-554/-566 |
NR0B2 |
small heterodimer
partner |
human |
Shih et al. 2001 |
11679424 |
|
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|
H4.156 |
TGATTAaAGTCCA |
-65/-53 |
Hp-25 |
hibernation-specific
protein |
chipmunk |
Kojima et al. 2000 |
10903495 |
|
|
|
H4.157 |
CGACCAaAGTCCA |
-132/-120 |
Cyp3a16 |
cytochrome P450 3A16 |
mouse |
Nakayama et al. 2001 |
11573935 |
|
|
|
H4.158 |
AGGTCAaGCTCCT |
-463/-451 |
Fmo1 |
flavin-containing monooxygenases |
rabbit |
Luo and Hines 2001 |
11723251 |
|
|
|
H4.159 |
AGGCTAaAGTACA |
-194/-182 |
Fmo1 |
flavin-containing monooxygenases |
rabbit |
Luo and Hines 2001 |
11723251 |
|
|
|
H4.160 |
AGATCAgACTCCT |
-485/-473 |
FMO1 |
flavin-containing
monooxygenases |
human |
Luo and Hines 2001 |
11723251 |
|
|
|
H4.161 |
GGGGCAaAGTTCA |
-1493/-1481 |
PPARA |
peroxisome
proliferator-activated receptor alpha |
human |
Pineda Torra et al. 2002 |
11981036 |
|
|
|
H4.162 |
GGGACAaAGAGCA |
-903/-915 |
F2 |
prothrombin |
human |
Ceelie et al. 2003 |
12911579 |
|
|
|
H4.163 |
ACGGCAaAGTCCA |
-69/-57 |
Ins1 |
insulin I |
rat |
Bartoov-Shifman et al. 2002 |
11994285 |
|
|
|
H4.164 |
GGAACCaGGGCCA |
5/17 |
G6pc |
glucose-6-phosphatase |
rat |
Rajas et al. 2002 |
11864989 |
|
|
|
H4.165 |
TGACCCcAGGTCC |
-665/-653 |
G6pc |
glucose-6-phosphatase |
mouse |
Rajas et al. 2002 |
11864989 |
|
|
|
H4.166 |
AGGTCAgGGGACA |
-1455/-1443 |
Inos |
inducible nitric
oxide synthetase |
rat |
Guo et al. 2002 |
11741883 |
|
|
|
H4.167 |
CAATTAaAGGTCA |
-7784/-7772 |
CYP3A4 |
cytochrome P450 3A4 |
human |
Tirona et al. 2003 |
12514743 |
|
|
|
H4.168 |
AGTCCAaAGGTCA |
-258/-246 |
Tcf2 |
hepatocyte nuclear
factor 1beta |
mouse |
Power and Cereghini 1996 |
8622679 |
|
|
|
H4.169 |
AGGTCAaAGGTCA |
|
synthetic |
|
|
Jiang et al. 1997 |
9126270 |
|
|
|
H4.170 |
AGGTCAaAGGTTA |
-6969 |
Aldob |
aldolase B, fructose-bisphosphate |
mouse |
Garrison et al. 2006 |
16618389 |
|
|
|
H4.171 |
AGAGCAaAGGTGT |
1105 |
Apoc2 |
apolipoprotein CII |
mouse |
Garrison et al. 2006 |
16618389 |
|
|
|
H4.172 |
AGGCCAgAGGTCA |
-5505 |
Crb3 |
crumbs homolog 3 Drosophila |
mouse |
Garrison et al. 2006 |
16618389 |
|
|
|
H4.173 |
AGGTCAgAGGACA |
-2867 |
Apoc2 |
apolipoprotein CII |
mouse |
Garrison et al. 2006 |
16618389 |
|
|
|
H4.174 |
AGAGCAaAGGTCT |
-7325 |
Aqp4 |
aquaporin 4 |
mouse |
Garrison et al. 2006 |
16618389 |
|
|
|
H4.175 |
AGGTCAgAGGCCT |
-1996 |
Cldn2 |
claudin 2 |
mouse |
Garrison et al. 2006 |
16618389 |
|
|
|
H4.176 |
AGGGCAaGGAGCA |
-6333 |
Gatm |
glycine
amidinotransferase |
mouse |
Garrison et al. 2006 |
16618389 |
|
|
|
H4.177 |
GGTTCAaAGGGCA |
-1439 |
Mucdhl |
mucin and cadherin-like |
mouse |
Garrison et al. 2006 |
16618389 |
|
|
|
H4.178 |
CTAGCAaAGTCCA |
-241 |
Neu3 |
sialidase 3 membrane sialidase |
mouse |
Garrison et al. 2006 |
16618389 |
|
|
|
H4.179 |
GTACCAaAGGTCC |
-2349 |
Saa1 |
serum amyloid A1 |
mouse |
Garrison et al. 2006 |
16618389 |
|
|
|
H4.180 |
GGTCCAcAGTTCA |
-8995 |
Slc39a4 |
solute carrier family 39 (zinc transporter), member 4 |
mouse |
Garrison et al. 2006 |
16618389 |
|
|
|
H4.181 |
AGGGCTaGGGTCA |
-948 |
Slc39a4 |
solute carrier family 39 (zinc transporter), member 4 |
mouse |
Garrison et al. 2006 |
16618389 |
|
|
|
H4.182 |
AGTCCAaAGGCCG |
-6134 |
Cdh1 |
cadherin 1 |
mouse |
Battle et al. 2006 |
16714383 |
|
|
|
H4.183 |
AGATCAaAGTGCA |
-6919 |
Cxadr |
coxsackie virus and adenovirus receptor |
mouse |
Battle et al. 2006 |
16714383 |
|
|
|
H4.184 |
AGATCAaTGTCCA |
-2346 |
Cxadr |
coxsackie virus and adenovirus receptor |
mouse |
Battle et al. 2006 |
16714383 |
|
|
|
H4.185 |
AGTCCAaAGGTTC |
-6501 |
Gjb1 |
gap junction protein,
beta 1 |
mouse |
Battle et al. 2006 |
16714383 |
|
|
|
H4.186 |
GGGTCAgAGGTCA |
-2056 |
Gpld1 |
glycosylphosphatidylinositol specific phospholipase D1 |
mouse |
Battle et al. 2006 |
16714383 |
|
|
|
H4.187 |
TGGGCAaAGGTCT |
-4626 |
Lgals9 |
lectin, galactose binding, soluble 9 |
mouse |
Battle et al. 2006 |
16714383 |
|
|
|
H4.188 |
GGCTCAaAGTTCA |
-7251 |
Npnt |
nephronectin |
mouse |
Battle et al. 2006 |
16714383 |
|
|
|
H4.189 |
AGGTCAgAGGGCA |
-8995 |
Npnt |
nephronectin |
mouse |
Battle et al. 2006 |
16714383 |
|
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|
H4.190 |
GGGTTAgAGTCCA |
-7328 |
Pkp2 |
plakophilin 2 |
mouse |
Battle et al. 2006 |
16714383 |
|
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|
H4.191 |
GGTCCAgAGTTCA |
-672 |
Rhpn2 |
rhophilin, Rho GTPase binding protein 2 |
mouse |
Battle et al. 2006 |
16714383 |
|
|
|
H4.192 |
AGGGCAaAGGTTT |
-6793 |
Vtn |
vitronectin |
mouse |
Battle et al. 2006 |
16714383 |
|
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|
H4.193 |
AGTCCAaAGTCAA |
-4419 |
Vtn |
vitronectin |
mouse |
Battle et al. 2006 |
16714383 |
|
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|
H4.194 |
AGGTTAaAGGTCA |
-271/-259 |
apoa5 |
apolipoprotein A-V |
human |
Prieur et al. 2003 |
16051671 |
|
|
|
H4.195 |
GGGACAaATTCCA |
-372/-360 |
UGT1A9 |
UDP glucuronosyltransferase 1 |
human |
Barbier et al. 2005 |
15470081 |
|
|
|
H4.196 |
AGACCAaAGGACA |
-150/-138 |
CYP2C9 |
cytochrome P450, family 2, subfamily C, polypeptide 9 |
human |
Kawashima et al. 2006 |
16540586 |
|
|
|
H4.197 |
AGACCAaAGGGCA |
-2300 |
Kcnj11 |
potassium inwardly-rectifying channel, subfamily J, member 11 |
mouse |
Gupta et al. 2005 |
15761495 |
|
|
|
H4.198 |
GTGGTAaAGGTCT |
-451/-439 |
Pck1 |
phosphoenolpyruvate carboxykinase |
mouse |
Scribner et al. 2007 |
16713227 |
|
|
|
H4.199 |
AGGTCAAAAGTAC |
-224/-243 |
Acms |
A-amino-B- carboxymuconate-e-semialdehyde |
mouse |
Shin et al. 2006 |
16807375 |
|
|
|
H4.200 |
AGGTCAaAGGCCT |
-7093/-7106 |
Fasn |
Fatty Acid Synthase |
rat |
Adamson et al. 2006 |
16800817 |
|
|
|
H4.201 |
AGTTTGgAGTCTG |
-61/-49 |
MTTP |
Microsomal triglyceride transfer
protein |
human |
Hirokane et al. 2004 |
15337761 |
|
|
|
H4.202 |
TGGAACtGGGTCA |
|
G6pc |
glucose 6 phosphate |
rat |
Rajas et al. 2002 |
11864989 |
|
|
|
H4.203 |
AGGGCAaAGACCT |
-6/-18 |
Nr1i3 |
constitutive androstane receptor |
mouse |
Ding et al. 2006 |
16825189 |
|
|
|
H4.204 |
TGTGCAaGGTTCA |
|
Ces2 |
carboxylesterase 2 |
mouse |
Furihata et al. 2006 |
16527247 |
|
|
|
H4.205 |
TGTCACAAGGTCA |
-39/-52 |
Gck |
Glucose kinase |
rat |
Roth et al. 2002 |
11950391 |
|
|
|
H4.206 |
AGGACAGAGTCCA |
-162/-150 |
Vlacsr |
solute carrier family 27
fatty acid transporter , member 5 |
mouse |
Inoue et al. 2004 |
14583614 |
|
|
|
H4.207 |
AGTTCCAAGGTCT |
-18/-6 |
Baat |
bile acid-Coenzyme A |
mouse |
Inoue et al. 2004 |
14583614 |
|
|
|
H4.208 |
TGGGCAaGGGGCA |
-49/-37 |
Prodh2 |
proline oxidase |
mouse |
Kamiya et al. 2004 |
15581617 |
|
|
|
H4.209 |
GGGACAgAGGTCA |
-137/-149 |
Prodh2 |
proline oxidase |
mouse |
Kamiya et al. 2004 |
15581617 |
|
|
|
H4.210 |
AGTGCAAGGGTCT |
-240/-252 |
G6PC |
glucose 6 phosphatase |
human |
Rhee et al. 2003 |
12651943 |
|
|
|
H4.211 |
AGGACAgAGTCTA |
-291/-303 |
G6PC |
glucose 6 phosphatase |
human |
Hirota et al. 2005 |
15702243 |
|
|
|
H4.212 |
TGAACTtAGGTCC |
-83/-71 |
MTTP |
Microsomal triglyceride transfer
protein |
human |
Sheena et al. 2005 |
15547294 |
|
|
|
H4.213 |
TGGGGAaAGGTCA |
-38/-50 |
MTTP |
Microsomal triglyceride transfer
protein |
human |
Sheena et al 2005 |
15547294 |
|
|
|
H4.214 |
TGATTAaAGTTCA |
-1766 |
PAK7 |
p21-activated kinase 7
(previously PAK5) |
human |
Niehof and Borlak 2005 |
15615695 |
|
|
|
H4.215 |
GGGTACaATGTTC |
|
PAK7 |
p21-activated kinase 7
(previously PAK5) |
human |
Niehof and Borlak 2005 |
15615695 |
|
|
|
H4.216 |
CTGACTaAGGTAC |
|
PAK7 |
p21-activated kinase 7
(previously PAK5) |
human |
Niehof and Borlak 2005 |
15615695 |
|
|
|
H4.217 |
AGGGCAtAGGTCA |
-1430/-1422 |
RPS6KA6 |
ribosomal protein S6 kinase
(previously RSK4) |
human |
Niehof and Borlak 2005 |
15615695 |
|
|
|
DR2
(Direct Repeat with a spacing of 2) |
|
|
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|
|
|
|
|
DR2.1 |
CGCTCAaaAGGTTG |
-2053 |
RPS6KA6 |
ribosomal protein S6 kinase
(previously RSK4) |
human |
Niehof and Borlak 2005 |
15615695 |
|
|
|
DR2.2 |
AGCCCTatTGACCC |
-1479/-1466 |
SLC22A1 |
solute carrier family 22
(organic cation transporter), member 1 (previously OCT1) |
human |
Saborowski et al 2006 |
16436500 |
|
|
|
DR2.3 |
TGATCTctTGTCCT |
-1454/1441 |
SLC22A1 |
solute carrier family 22
(organic cation transporter), member 1 (previously OCT1) |
human |
Saborowski et al 2006 |
16436500 |
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Legend: |
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1See Table S1B for motifs H4.72 through H4.141 |
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2Postion given in reference. See Table S2A for current position in
human genes UCSC Genome Browser (vers. 18) |
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3Current gene symbol is given, may be different from that in
reference. See HGNC (HUGO: http://www.genenames.org/index.html) |
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Prepared
11/07 by: |
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Eugene
Bolotin, Jake Scnabl, Frances M Sladek |
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